So the game consisted of a lot of rooms, like this panoramic lab where you do tests and minigames to find out the specific effects many of these chemicals have on your brain. A lot of the things in this room I brought into Flash and gave them many specific animations and transition scenes:
Here's another room of the lab which holds a lab rat that I ended up doing many animations for a minigame in which you have to shock him (!):
Another background I made that I like is the bedroom of this paint addict where she has this cocky roomba and a floating mattress for a bed:
Besides some of the background most of the work entailed making a lot of random UI, Icons, objects, and other various assets for the minigames. Here's a few:
Yes, a talking glial cell.
If you are truly interested in playing these, they are on the Rice University site for them. You can't save though, and I only worked on some parts of Episodes 2 and 3 (Some of which is already here :)).